Thursday, June 11, 2015

How a paleontologist got his career on track



Ichnology is a subdiscipline of paleontology that focuses on tracks and traces. "This way of seeing prehistoric life has no greater champion than Emory University paleontologist Anthony Martin," writes Brian Switek on the National Geographic site Phenomena. "Martin has pondered over the meaning of dinosaur burrows, cataloged how traces of modern life can help us interpret the past, and eloquently expressed why no picture of the past is complete without considering what trace fossils tell us."

Watch the above video to learn more about Martin's philosophy on developing "ichnovision."

Related:
Bringing to life 'Dinosaurs Without Bones'
Polar dinosaur tracks open new trail to past

Monday, June 8, 2015

Walt Disney's little-known 'Skeleton Dance'

A still from "The Skeleton Dance." Watch the full short in the YouTube video below.

Sean Braswell of OZY writes in USA Today about a disturbing encounter that the young Walt Disney had with an owl, and how it may have marked his later life and work. Following is an excerpt from the article:

"There is a persistent, and unsubstantiated, rumor that Walt Disney's cryogenically frozen body resides in a vault, waiting to be restored to life when summer returns to Arendelle and modern science triumps over death. It's easy to see how the rumor may have been started since, from the beginning of Disney's career, as chronicled by professor Gary Laderman of Emory University, the American icon had a curious obsesson with death. As early as 1929, on the heels of his first big splash with Mickey Mouse as Steamboat Willie, Disney offered a biazrre follow-up entitled The Skeleton Dance, which opens, not surprisingly, with a terrified owl perched in a tree. ...

"The graveyard romp turned out to be a macabre hit, and over the next decades, as America faced economic hardship, war, nuclear annihilation and drastic social change, Disney's films helped the nation navigate good and evil, vice and virtue. And for most of his early tales, Laderman observes, 'death, or the threat of death, is the motor, the driving force that enlivens each narrative.'"

Read the whole article in USA Today.



Tuesday, June 2, 2015

Biologist Berry Brosi on Obama's 'plan bee'

"The fate of bees will affect people very viscerally," says Berry Brosi, shown tending his hive on the roof of Emory's Math and Science Center.

By Carol Clark

President Obama recently launched perhaps the most ambitious national plan ever aimed at protecting insects. The National Strategy to Promote the Health of Honeybees and Other Pollinators calls for an “all hands on deck” approach to slow their alarming declines. “Pollinators are critical to our nation’s economy, food security and environmental health,” notes the plan, prepared by the White House Pollinator Health Task Force.

“It’s an important wake-up call,” says Berry Brosi, an Emory biologist and ecologist whose research encompasses both managed honeybees and wild bees. “It’s past time for us to realize the vital links between biodiversity, our environment and our own well-being. Ultimately, that’s what this national plan is about.”

Honeybee pollination alone is worth more than $15 billion to U.S. agriculture, “providing the backbone to ensuring our diets are plentiful with fruits, nuts and vegetables,” the plan states. “Pollinators, most often honeybees, are responsible for one in every three bites of food we take.”

“This isn’t about saving an exotic animal in a faraway place, like the panda,” Brosi says. “We’re talking about the possibility of not having nuts and fruits for our breakfast, shortages of tomatoes and melons, and rising milk prices due to a lack of alfalfa pollination.”

Bees are important to more than just food crops, he adds. Cotton plants, for example, need pollination to produce the fibers that are a cornerstone of the garment industry.

“The fate of bees will affect people very viscerally,” Brosi says.

Pollinators are responsible for one out of every three bites of food we eat.

Many pollinators, including bees, birds, butterflies, bats and other animals, are in serious decline in the United States and worldwide. Brosi is one of 75 authors working on a global assessment of pollinators for the UN’s Intergovernmental Panel for Biodiversity Ecosystem Services (IPBES).

“In some places in China, people are hand-pollinating apple trees because they don’t have enough of an insect workforce to do it,” Brosi says. “Examples like that should be sobering. Pollination is an extremely labor-intensive task that bees are specially evolved to do.”

Currently, about 2,000 commercial U.S. beekeepers manage their bee colonies as “livestock,” traveling across the country to service pollination contracts with farmers and honey producers. Each year, however, the number of bee colonies has gone down even as beekeepers struggle to rebuild them. Since the 1940s, when there were about 5.7 million colonies in the United States, the number of managed colonies has shrunk by nearly half, according to the USDA.

“Wild bee populations are also declining wherever we look, although we don’t have good long-term data,” Brosi says. “Several species of bumble bees, for example, are declining at alarming rates, and we’ve seen the extinction of at least one species in the United States during the last 20 years.”

The reasons for these losses appear to be myriad and complex, ranging from shrinking habitats to parasites, diseases and pesticide use.

Monarchs need milkweed to survive.
The phenomenon of the winter migration of the monarch butterfly, from across the United States to Mexico, is also imperiled. The three lowest overwintering populations of the Eastern monarch on record have occurred during the last 10 years. The all-time low was recorded last winter, when the monarchs occupied just 0.67 hectares, or 10 percent of the habitat in Mexico that they did two decades ago.

Emory evolutionary biologist Jaap de Roode, who runs one of the few labs in the world focused on monarch butterflies, says that most of this decline is due to disappearing habitat, especially the milkweed plants that monarchs feed on as caterpillars. “Preservation of remaining milkweed and restoration of habitat are key to maintaining the spectacular migration of this iconic insect,” de Roode says.

The White House pollinator strategy outlines specific aims and a timeline to achieve them, including:

Reduce honeybee colony losses during the winter to no more than 15 percent within a decade. 

Boost the overwintering population of the Eastern monarchs by 225 million butterflies occupying approximately six hectares (15 acres) of habitat in Mexico by 2020. 

Restore or enhance seven million acres of land for pollinators over the next five years. 

The strategy recommends an additional $20 million in funding for the USDA specifically for pollinator research and an additional $1.5 million for the Environmental Protection Agency’s pesticide research programs.

“It’s great that the strategy has specific goals and recommendations, but it doesn’t go nearly far enough, particularly in the area of pesticides,” Brosi says.

Ninety percent of flowering plants and many other animals, not just humans, depend on pollinators for their survival.

A class of pesticides known as neonicotinoids, for example, are widely used in the United States but banned in Europe due to their effect on bees. While neonicotinoids may not kill bees outright, they can have devastating sub-lethal effects, Brosi says. Even minute doses of these pesticides have been found to hamper bees’ learning, memory and navigation skills.

The national pollinator plan calls for an expedited review of the use of neonicotinoids in the United States, to be completed by 2018. “That’s not soon enough,” Brosi says, adding that the plan’s recommendation for $1.5 million for the EPA’s pesticide programs is a drop in the bucket.

“We need to do serious assessments of the effects on pollinators for a wide range of pesticide types,” Brosi says. “We don’t know much about alternatives to neonicotinoids. Farmers could replace them with something even worse.”

Ninety percent of flowering plants and many other animals, not just humans, depend on pollinators for their survival. “There could be a lot of hidden declines occurring in association with declines in pollinators that we won’t pick up on for a long time,” Brosi says. “A lot of trees are long-lived, for example, so if their populations are not regenerating normally we may not notice it right away. That’s frightening, and one of the areas I’m most concerned about.”

One optimistic note is that bees and other insect pollinators tend to be highly resilient, Brosi adds. “They can thrive in places you wouldn’t expect, such as cities. It’s an interesting conundrum that pollinators do the worst in industrial agriculture areas where we need them the most. A bigger solution to this problem needs to be re-imagining the ways in which our agricultural system functions. When you limit the diversity of plant species and douse fields with pesticides, it can have a lot of unintended negative consequences.”

Related:
Bees 'betray' their flowers when pollinator species decline 
Emory to ban bee-harming pesticides
Mystery of monarch migration takes new turn
Pumping wings: Muscles make migrating monarchs unique
Democracy works for Endangered Species Act

Friday, May 22, 2015

BEINGS launches work on global consensus for ethical course of biotech

Novelist Margaret Atwood on stage at BEINGS with cognitive scientist Steven Pinker (center) and Thierry Magnin, who is a physicist, Catholic priest and professor of ethics.

By Carol Clark

Some of the world’s preeminent scientists and bioethicists gathered with leaders of philosophy, sociology, law, policy and religion in Atlanta May 18-20 for BEINGS 2015. The landmark summit launched work on a global consensus for the direction of biotechnology for the 21st century.

The setting for this futuristic event: The Tabernacle, an historic former church turned music venue, with red walls swirled with murals and wood floors that creak like the deck of a ship. Novelist Margaret Atwood, creator of fictional laboratory creatures such as the pigoon, gave a keynote.

“The lid is off the Pandora’s Box of genetic modification,” Atwood said. “This is a pivotal moment. Deliberate well. Keep the bar high. Take precautions.”

And with that, the tumultuous voyage began.

BEINGS, short for Biotech and the Ethical Imagination: A Global Summit, was organized by Paul Root Wolpe, director of the Emory Center for Ethics. “The idea is audacious,” Wolpe admitted of their plan to write global guidelines for the aspirations, ethics and policies of biotechnology within the next eight months.

Paul Root Wolpe on the potential and perils of biotechnology:


The BEINGS delegates are up to the task, he added. About 135 delegates from 25 countries joined the summit to take up the challenge of charting a course for how biotechnology can best contribute to human flourishing while navigating the potential perils and ethical pitfalls.

Tensions soon emerged as delegates from different perspectives took the microphone.

Harvard cognitive scientist Steven Pinker threw down the deregulatory gauntlet. “Stay out of the way” of biotech innovation, he urged, as scientists seek to prevent, treat and cure diseases. He cited major improvements in life expectancy around the world largely due to biomedical breakthroughs.

Pinker downplayed fears of eugenics and “designer” babies, while others countered that we are living in a world of competition and should be extremely concerned about the potential power to “edit” the genes of the human germline.

Princeton’s Ruha Benjamin, author of “People’s Science: Bodies and Rights on the Stem Cell Frontier,” called for the inclusion of those who identify as disabled in discussions about the goals and policies of biotechnology. “Anything less is presumptive and paternalistic,” she said.

It’s important to think about how to distribute benefits, added Benjamin, an assistant professor of African American Studies focused on issues of science and health. “There is no such thing as trickle-down biotech.”

Benjamin and three other delegates summarized their thoughts in an opinion piece for the Guardian: “As we pursue promising treatments, we should also be asking what we are trying to treat; whether it is best treated biomedically; who is included as funders, patients, donors and scientists; who is left out; who profits; and whether or not the treatment masks, depoliticizes, or exacerbates political and social inequality.”

By the afternoon of the first day of the summit, Wolpe said he knew the gathering was going to be a success. “I could tell by the tone of the conversation, and how people were lining up at the microphones to speak, that we had struck a chord,” he says. “We need to bridge a tension in philosophies, but both sides believe that curing human diseases and stopping suffering is an important goal. We have to get outside of the theoretical arguments and start talking about practical, specific issues.”

BEINGS divided discussions into the following major topic areas.

Aspirations and Goals: How should we think about differing goals of biotechnology, from making money, to curing disease, to understanding the basic nature of the organic world, to promoting human flourishing?

Alien Organisms and New (ID)entities: Cellular biotechnologies enable us to engineer novel organisms for industrial, environmental or therapeutic purposes. How might these organisms modify existing social systems and ecosystems, and how do we balance innovation with responsibility?

Bioterror/Bioerror: What are the potential dangers of synthetic biological materials and pathogens in terms of accidents or criminal intent?

Ownership: Should custom-designed genetic material or organisms be subject to patents and copyright?

Donorship: How can government and private sector entities collaborate to protect donors and create standards for bio- and stem-cell banks?

“All voices have a place,” Wolpe stressed. “We don’t have to agree on everything. Wherever we have honest, important disagreement in an area, we will note it in the final document.”

At the end of the summit, more than 80 delegates committed to actively working on writing the guidelines for the five major topic areas. Another 30 agreed to serve as reviewers and editors as drafts are ready. Their goal is to have a final document by next January, which they will submit for publication by a major journal.

“We do not represent just a single segment of society or government body or special interest,” Wolpe says. “We’re a group of global citizens who believe that for biotechnology to be used successfully it has to be used ethically. We as a group can create a document that is persuasive and has value.”

Related:
The science and ethics of X-Men
Blurring the lines between life forms

Tuesday, May 19, 2015

For spider monkeys, social grooming comes at a cost

Spider monkeys are fission-fusion socializers, meaning they often break up into smaller groups and then rejoin the larger community. "They basically hang out with whoever they want, and that changes often," says Thomas Gillespie, an Emory disease ecologist. (Photos by Rebecca Rimbach)

By Carol Clark

Social grooming, or helping others to stay clean and free of lice and other ecto-parasites, has long been associated with hygiene and good health in wild primates. In the process of picking out ecto-parasites, however, the groomers may be picking up internal ones, a new study finds.

The journal Philosophical Transactions of the Royal Society B published the results of the study on critically endangered brown spider monkeys, showing that physical contact is associated with the spread of several common gastrointestinal parasites.

“Previously, it was generally assumed that animals are more likely to pick up these parasites from feces or other environmental sources,” says Thomas Gillespie, a disease ecologist at Emory University whose lab led the study. “Our research shows that the external surfaces of animals can serve as viable locations for development to infective stages of such parasites.”

Living in groups comes with costs and benefits. The benefits include more eyes, ears, noses and collective knowledge to hunt food sources and to avoid predators. The costs are competition for food and for mates. And growing evidence is revealing how group interactions affect the dynamics of disease transmission among social animals.

“Breakthroughs in technology are allowing for more detailed network analyses, so that we can study the connection between sociality and health in ways that we couldn’t in the past,” Gillespie says. “We are working on models of health risk factors for different species of endangered primates, to try to ensure that disease does not finish them off, but our data could also have implications for people.”

The current study centered on a community of 16 brown spider monkeys in Hacienda San Juan, a patch of tropical rainforest in central Columbia.

Watch a data visualization of the day-to-day movements of the spider monkeys, created by study co-author Donal Bisanzio, who was an Emory post-doctoral fellow.


Spider monkeys are arboreal, spending most of their time in the trees. They swing from branch to branch through the canopy by their prehensile tails. Their communities split into smaller groups that later reconvene, a trait known as fission-fusion.

“They basically hang out with whoever they want, and that changes often,” Gillespie says. This fission-fusion trait is associated with intelligence, he adds, and is also seen in chimpanzees, dolphins and humans.

While humans are far more complex, subdividing into groups bound by their families, churches, schools and workplaces, brown spider monkeys split into smaller groups primarily to search for food. “That enables them to cover more ground,” Gillespie explains. “They spend most of their day looking for ripe fruit, in between mating and playing.”

The monkeys keep in contact with other members of the group through loud vocalizations. “They can really put on a show when they’ve found a fig tree full of fruit,” Gillespie says.

Spider monkeys are arboreal, spending most of their time in trees.

The interactions of fission-fusion animals are difficult to study in the wild because they are often on the move. For this study, the research team followed 12 individual spider monkeys of the community, collecting about 160 hours of data for each of them over the course of two years. The researchers recorded all social interactions that involved physical contact – including grooming, resting, embracing, mating and social play – and the duration of each interaction. They also collected a total of 166 fecal samples from the study group during the two-year period of the study and tested them for a variety of parasites.

The researchers used the data to diagram the contact and proximity networks, along with the levels of parasite infections, for each individual.

The results showed no correlation between mere proximity and parasite infection, but a strong correlation between physical contact and infection. Specifically, infections with the roundworms Strongyloides and Trichostrongylus were associated with grooming interactions.

“Our findings suggest that social grooming is the biggest risk for parasite transmission among this community of spider monkeys,” Gillespie says. “The groomer is removing matted fur and debris from another monkey, and some of that debris can contain active life stages of parasites that are not visible to the naked eye.”

In addition to Gillespie and Bisanzio, the study authors include Rebecca Rimbach of the German Primate Center and Fundación Proyecto Primates Colombia; Nelson Galvis and Andrés Link, of the Funación Proyect Primates and the Universidad de Los Andes; and Anthony Di Fiore of the Fundación Proyecto Primates and the University of Texas at Austin.

Related:
Disease poses risk to chimpanzee conservation, Gombe study finds
Ebola's back story: How germs jump species
Sanctuary chimps show high rates of drug-resistant staph